BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031D08LP1|AL429389
(905 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1761 1694 0.0
>3x_Contig1761
Length = 23186
Score = 1694 bits (851), Expect = 0.0
Identities = 881/893 (98%), Gaps = 1/893 (0%)
Strand = Plus / Plus
Query: 1 gatccgagctgagtttwataagttaagtagtttatgtcagagaagctttaatcgatgagt 60
|||||||||||||||| |||||| ||||||| || ||||||||||||||||||||||||
Sbjct: 17284 gatccgagctgagtttaataagtaaagtagtaaat-tcagagaagctttaatcgatgagt 17342
Query: 61 gttatctttaaaatttcatctagatttcattttcctatctctgtgtgaattgtcaatcta 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17343 gtaatctttaaaatttcatctagatttcattttcctatctctgtgtgaattgtcaatcta 17402
Query: 121 gtgggtctacttactttacattcttttggttctataatatctgcgcttttttctatttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17403 gtgggtctacttactttacattcttttggttctataatatctgcgcttttttctatttcc 17462
Query: 181 gtcaaattcgaattataaccattttaactgcyattatwattacacaaatcttcatacgtg 240
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 17463 gtcaaattcgaattataaccattttaactgcaattataattacacaaatcttcatacgtg 17522
Query: 241 ttcccmagatttgatataaagccatttggtattgccatcgctcttttccgcattactcag 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17523 ttcccaagatttgatataaagccatttggtattgccatcgctcttttccgcattactcag 17582
Query: 301 aattaagataattattctaattcattgacgagaatatacaggaccagtttgctccccgaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17583 aattaagataattattctaattcattgacgagaatatacaggaccagtttgctccccgaa 17642
Query: 361 gtttacgaatatttcctatatctgttttgagatgagatatgtgttaagatccatcgcatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17643 gtttacgaatatttcctatatctgttttgagatgagatatgtgttaagatccatcgcatt 17702
Query: 421 aggtcgtgggcttcgcgcaccaagtagaagttttattattggtccaactcgtcagtttcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17703 aggtcgtgggcttcgcgcaccaagtagaagttttattattggtccaactcgtcagtttcc 17762
Query: 481 gctagcagtggctcctcgttattactctcaagaaactccgaaacaaaaacagccagttca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 17763 gctagcagtggctcctcgttattactctcaagaaactccgaaacaaaaacagccagtaca 17822
Query: 541 gccacaacaaccgtcaactgcgctacaacatcaacctaaaccagctcttccggttaagaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17823 gccacaacaaccgtcaactgcgctacaacatcaacctaaaccagctcttccggttaagaa 17882
Query: 601 agaagctgaaccaaagctatcactgtgggctaaagttaaacatgaagctcagcattattg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17883 agaagctgaaccaaagctatcactgtgggctaaagttaaacatgaagctcagcattattg 17942
Query: 661 ggatggtaccaaattattaggtctcgaagttaagatcgccatgagattggttatgaagat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17943 ggatggtaccaaattattaggtctcgaagttaagatcgccatgagattggttatgaagat 18002
Query: 721 gtcagctggttacgaactaagtcgtagagaaaagattcaattgaaaagamctactcaaga 780
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 18003 gtcagctggttacgaactaagtcgtagagaaaagattcaattgaaaagaactactcaaga 18062
Query: 781 tatgattagactagtgccattcagtgcttttgtcattgtcccatttgctgaacttttgtt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18063 tatgattagactagtgccattcagtgcttttgtcattgtcccatttgctgaacttttgtt 18122
Query: 841 gccaattgccttgaaacttttcccaaatcttttgcctyccacttacgaatcta 893
||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 18123 gccaattgccttgaaacttttcccaaatcttttgccttccacttacgaatcta 18175
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6765
Number of Sequences: 1807
Number of extensions: 6765
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 905
length of database: 10,358,551
effective HSP length: 16
effective length of query: 889
effective length of database: 10,329,639
effective search space: 9183049071
effective search space used: 9183049071
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)